Short-read sequencing

We are skilled in delivering high-quality next-generation sequencing data from RNA and DNA samples, using Illumina NovaSeq and MiSeq platforms.
The NovaSeq is capable of generating many tens of gigabases per day while the MiSeq is more suitable for small sequencing projects.

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Training

From introductory coding courses (Linux, R, Python) to advanced workshops on the latest bioinformatics tools (RNA-seq data analysis, metagenomics), we offer a wide range of courses equipping you with the skills you need to tackle your next genomic analysis.

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Bioinformatics

Bioinformatic analysis is at the heart of what we do, and our dedicated team of research informaticians is skilled in all aspects of next generation genomics and genetic analyses. We have an extensive, secure compute install for high-throughput data processing.

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Long-read sequencing

The facility operates the PacBio Sequel IIe and the Oxford Nanopore PromethION for long read sequencing. These instruments are the gold standard for generating DNA and RNA sequence with longer read length and high accuracy for genome and transcriptome assembly and analysis.

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Latest news

Edinburgh Genomics - PromethION 24 Launch Event
Edinburgh Genomics - PromethION 24 Launch Event – Hybrid TUESDAY 24TH MAY 09:30 AM – 16:30 PM Room 1.19, Murchison House, King’s Buildings Campus Registration Link: https://...
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Edinburgh Genomics Christmas closing dates
The Edinburgh Genomics facility will be closed over the festive period (23rd December - 5th January). Samples can be sent until Wednesday 22nd December at 4pm. A...
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Free cloud-based scRNA data analysis tool
The Cellenics platform is designed specifically for biologists. It provides automatic data processing, pre-loaded interactive plots, a point-and-click interface to fully explore...
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Publications

Selective miRNA Modulation Fails to Activate HIV Replication in In Vitro Latency Models López-Huertas, M. R., Morín, M., Madrid-Elena, N., Gutiérrez, C., Jiménez-Tormo, L., Santoyo, J., Sanz-Rodríguez, F., Moreno Pelayo, M. Á., Bermejo, L. G. & Moreno, S. 2019 In: Molecular therapy. Nucleic acids p. 323-336 14 p. Custom text:
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Transcriptomics Analysis of Porcine Caudal Dorsal Root Ganglia in Tail Amputated Pigs Shows Long-Term Effects on Many Pain-Associated Genes Sandercock, D. A., Barnett, M. W., Coe, J. E., Downing, A. C., Nirmal, A. J., Di Giminiani, P., Edwards, S. A. & Freeman, T. C. 2019 In: Frontiers in Veterinary Science Custom text:
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Whole Genome Sequencing of Giant Schnauzer Dogs with Progressive Retinal Atrophy Establishes NECAP1 as a Novel Candidate Gene for Retinal Degeneration Hitti, R. J., Oliver, J. A. C., Schofield, E. C., Bauer, A., Kaukonen, M., Forman, O. P., Leeb, T., Lohi, H., Burmeister, L. M., Sargan, D. & Mellersh, C. S. 2019 In: Genes Custom text:
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Adaptive evolution Is common in rapid evolutionary radiations Nevado, B., Wong, E. L., Osborne, O. G. & Filatov, D. A. 2019 In: Current Biology Custom text:
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Lack of long-term acclimation in Antarctic encrusting species suggests vulnerability to warming Clark, M. S., Villota Nieva, L., Hoffman, J. I., Davies, A. J., Trivedi, U. H., Turner, F., Ashton, G. V., Peck, L. S. & Trivedi, U. 2019 In: Nature Communications Custom text:
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