SERVICE UPDATE (last update 7th January 2021):



Edinburgh Genomics is open again for business in 2021. Due to COVID restrictions we are working at reduced capacity. Contact us for more details: edgenomics-admin@ed.ac.uk




Short-read sequencing

We are skilled in delivering high-quality next-generation sequencing data from RNA and DNA samples, using Illumina NovaSeq and MiSeq platforms.
The NovaSeq is capable of generating many tens of gigabases per day while the MiSeq is more suitable for small sequencing projects.

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Training

From introductory coding courses (Linux, R, Python) to advanced workshops on the latest bioinformatics tools (RNA-seq data analysis, metagenomics), we offer a wide range of courses equipping you with the skills you need to tackle your next genomic analysis.

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Bioinformatics

Bioinformatic analysis is at the heart of what we do, and our dedicated team of research informaticians is skilled in all aspects of next generation genomics and genetic analyses. We have an extensive, secure compute install for high-throughput data processing.

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Long-read sequencing

The facility operates the PacBio Sequel IIe and the Oxford Nanopore PromethION for long read sequencing. These instruments are the gold standard for generating DNA and RNA sequence with longer read length and high accuracy for genome and transcriptome assembly and analysis.

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Latest news

Edinburgh Genomics, NBAF, and NEOF
In late 2020, NERC commissioned a new environmental omics facility. The new two node NERC Environmental Omics Facility (NEOF) is based at the Universities of Liverpool and...
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UKRI Innovation Scholars: Data Science Training in Health and Bioscience
Edinburgh Genomics is pleased to have joined a University-wide team that won UKRI funds to deliver a UKRI Innovation Scholars: Data Science Training in Health...
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Edinburgh Genomics' Virtual PacBio Day 16th March 2021
Edinburgh Genomics (EdGe) and PacBio invite you to a Virtual PacBio Day on Tuesday 16th of March from 2pm. We’ll have some great talks from EdGe, PacBio, and from our...
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Publications

Selective miRNA Modulation Fails to Activate HIV Replication in In Vitro Latency Models López-Huertas, M. R., Morín, M., Madrid-Elena, N., Gutiérrez, C., Jiménez-Tormo, L., Santoyo, J., Sanz-Rodríguez, F., Moreno Pelayo, M. Á., Bermejo, L. G. & Moreno, S. 2019 In: Molecular therapy. Nucleic acids p. 323-336 14 p. Custom text:
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Transcriptomics Analysis of Porcine Caudal Dorsal Root Ganglia in Tail Amputated Pigs Shows Long-Term Effects on Many Pain-Associated Genes Sandercock, D. A., Barnett, M. W., Coe, J. E., Downing, A. C., Nirmal, A. J., Di Giminiani, P., Edwards, S. A. & Freeman, T. C. 2019 In: Frontiers in Veterinary Science Custom text:
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Whole Genome Sequencing of Giant Schnauzer Dogs with Progressive Retinal Atrophy Establishes NECAP1 as a Novel Candidate Gene for Retinal Degeneration Hitti, R. J., Oliver, J. A. C., Schofield, E. C., Bauer, A., Kaukonen, M., Forman, O. P., Leeb, T., Lohi, H., Burmeister, L. M., Sargan, D. & Mellersh, C. S. 2019 In: Genes Custom text:
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Adaptive evolution Is common in rapid evolutionary radiations Nevado, B., Wong, E. L., Osborne, O. G. & Filatov, D. A. 2019 In: Current Biology Custom text:
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Lack of long-term acclimation in Antarctic encrusting species suggests vulnerability to warming Clark, M. S., Villota Nieva, L., Hoffman, J. I., Davies, A. J., Trivedi, U. H., Turner, F., Ashton, G. V., Peck, L. S. & Trivedi, U. 2019 In: Nature Communications Custom text:
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