Sequencing

We are skilled in delivering high-quality next-generation sequencing data from RNA and DNA samples, using Illumina HiSeq X, HiSeq 4000, HiSeq2500 and MiSeq platforms. We also regularly carry out Sanger dideoxy sequencing, using AB3730 instruments.

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Clinical Genomics WGS

Whole Genome Sequencing of samples using the Illumina HiSeqX 10 platform produces high quality data at an unprecedented speed and low cost. Laboratory automation using Illumina SeqLab platform allows very high efficiency and low variability.

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Genotyping-Arrays

High-density genotyping of pedigrees and populations, and microarray analyses of expression, binding and copy number variation are mainstays of genetic and genomic analysis. We offer genotyping and microarray gene expression analyses using Illumina and Affymetrix platforms.

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Bioinformatics

Bioinformatic analysis is at the heart of what we do, and our dedicated team of research informaticians is skilled in all aspects of next generation genomics and genetic analyses. We have an extensive, secure compute install for high-throughput data processing.

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Latest news

Edinburgh Genomics will be hosting a User Group meeting in the Swann Lecture Theatre (King's Building campus) on Wednesday 30th November 2016. To register to attend this meeting...
Scientists at Scotland’s Rural College, together with colleagues at the University of Edinburgh and Rothamsted Research, have unravelled the genome of Ramularia, a fungal...
On June 3rd 2016, our Clinical Division hosted a visit by NHS Scotland and the Chief Scientist Office. This was an opportunity to see for themselves the Edinburgh Genomics high...
Edinburgh scientists have decoded the genetic make-up of more than one thousand people as part of a long-term study to examine why some people's brains age better than others....
Scottish Genomes Partnership backed by £6 million. Minister for Sport, Health Improvement and Mental Health, Jamie Hepburn has announced a £6 million investment in the Scottish...

Publications

11β-hydroxysteroid dehydrogenase-1 deficiency alters the gut microbiome response to western diet Johnson, J. S., Opiyo, M. N., Thomson, M., Gharbi, K., Seckl, J. R., Heger, A. & Chapman, K. 2016 In: Journal of Endocrinology Custom text:
Serological and molecular epidemiology of canine adenovirus type 1 in red foxes (<i>Vulpes vulpes</i>) in the United Kingdom Walker, D., Fee , S., Hartley, G., Learmount, J., O'Hagan, M., Meredith, A., Bronsvoort, M., Porphyre, T., Sharp, C. & Philbey, A. 2016 In: Scientific Reports 12 p. Custom text:
The genome of the emerging barley pathogen Ramularia collo-cygni Mcgrann, G. R. D., Andongabo, A., Sjökvist, E., Trivedi, U., Dussart, F., Kaczmarek, M., Mackenzie, A., Fountaine, J. M., Taylor, J. M. G., Paterson, L. J., Gorniak, K., Burnett, F., Kanyuka, K., Hammond-kosack, K. E., Rudd, J. J., Blaxter, M.... 2016 In: BMC Genomics Custom text:
First identification of porcine parvovirus 6 in Poland Cui, J., Fan, J., Freitas Gerber, P., Biernacka , K., Stadejek, T., Xiao, C. & Opriessnig, T. 2016 In: Virus Genes Custom text:
Macrophage colony-stimulating factor (CSF1) controls monocyte production and maturation and the steady-state size of the liver in pigs Sauter, K. A., Waddell, L. A., Lisowski, Z. M., Young, R., Lefevre, L., Davis, G. M., Clohisey, S. M., McCulloch, M. B., Magowan, E., Mabbott, N. A., Summers, K. M. & Hume, D. A. 2016 In: American Journal of Physiology - Gastrointestinal and Liver Physiology Custom text:

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