Software

Software from the Blaxter lab is available at http://www.nematodes.org/bioinformatics/

A list of software from Mick Watson's group is linked below:

  • Meta4: a web application for sharing and annotating metagenomic gene predictions using web services [link]
  • viRome: an R package for the visualization and analysis of viral small RNA sequence datasets [link]
  • CORNA: testing gene lists for regulation by microRNAs [link]
  • DetectiV: visualization, normalization and significance testing for pathogen-detection microarray data [link]
  • CoXpress: differential co-expression in gene expression data [link]
  • ProGenExpress: Visualization of quantitative data on prokaryotic genomes [link]